BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E09SP1|AL428566
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1007 1336 0.0
>3x_Contig1007
Length = 3570
Score = 1336 bits (670), Expect = 0.0
Identities = 711/728 (97%), Gaps = 1/728 (0%)
Strand = Plus / Minus
Query: 149 tcaattatcaaaagaagagcaacggaaatttttaactttgaggtttaacttattgtttgg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3488 tcaattatcaaaagaagagcaacggaaatttttaactttgaggtttaacttattgtttgg 3429
Query: 209 cattactgttttaaatgtcaatcaggtcgtgtatccggcattttgtaaagtgacttcaag 268
|||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 3428 cattactgccttaaatgtcaatcaggtcgtgtatcccgcattttctaaagtgacttcaag 3369
Query: 269 ttcgaatgatttcggtatacttacggaccagaca-caaatagtattggtgcctgattcaa 327
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 3368 ttcgaatgatttcggtatacttacggaccagagaacaaatagtattggtgcctgattcaa 3309
Query: 328 atgttgtagaacaatcgcggtctaatgatgagttcacggagttcgatcatttgthttctt 387
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3308 atgttgtaggacaatcgcggtctaatgatgagttcacggagttcgatcatttgttttctt 3249
Query: 388 tgcatgtaaaaatccaatcattgttggatccggtacctgtagaattymtgtcacctccac 447
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3248 tgcatgtgaaaatccaatcattgttggatccggtacctgtagaatttttgtcacctccac 3189
Query: 448 aacctgatacaactgacaacgaccttttcgcatttgtccaaccaaatatbcttcttcagt 507
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3188 aacctgatacaactgacaacgaccttttcgcatttgtccaaccaaatattcttcttcagt 3129
Query: 508 tgggtgtcccaagcggaacatttgtsagagtgattgctgaagagcaggaaatgttggttc 567
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3128 tgggtgtcccaagcggaacatttgtcagagtgattgctgaagagcaggaaatgttggttc 3069
Query: 568 aacttttcgtcttattcgctcccaacgaatatgaatgtgattcattatatgtytccccca 627
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3068 aacttttcgtcttattcgctcccaacgaatatgaatgtgattcattatatgtctccccca 3009
Query: 628 gggtaaggtacgtattcatgaaccatgccagagtaatcatacagaggcctaatctagcat 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3008 gggtaaggtacgtattcatgaaccatgccagagtaatcatacagaggcctaatctagcat 2949
Query: 688 tgaatagattttyagtttcaaatgctgtgacattatctagaatcggctgccaaattaatg 747
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2948 tgaatagattttcagtttcaaatgctgtgacattatctagaatcggctgccaaattaatg 2889
Query: 748 cccagagacgctaccaagatattatttcccatcatttagcattatatttbcgtgaaaaac 807
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2888 cccagagacgctaccaagatattatttcccatcatttagcattatattttagtgaaaaac 2829
Query: 808 agcgcattgttaaagtaggtgacttaatacctattactttcgactccaattatgcatcga 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2828 agcgcattgttaaagtaggtgacttaatacctattactttcgactccaattatgcatcga 2769
Query: 868 tgtttacc 875
||||||||
Sbjct: 2768 tgtttacc 2761
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5598
Number of Sequences: 1807
Number of extensions: 5598
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)